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1

Mapping of the Human Thromboxane Synthase Gene (TBXAS1) to Chromosome 7q34-q35 by Two-Color Fluorescence in Situ Hybridization

Michael B. Chase, Seung Joon Baek, Diane C. Purtell, Stuart Schwartz, Rong-Fong Shen

Journal:

Year:

1993

File:

PDF, 190 KB

1993

2

RFNN control for PMLSM drive via backstepping technique

Faa-Jeng Lin, Po-Hung Shen, Rong-Fong Fung

Journal:

IEEE Transactions on Aerospace and Electronic Systems

Year:

2005

Language:

english

File:

PDF, 2.54 MB

english, 2005

3

Enrichment of Distinct Microfilament-Associated and GTP-Binding-Proteins in Membrane/Microvilli Fractions from Lymphoid Cells

Hao, Jian-Jiang, Wang, Guanghui, Pisitkun, Trairak, Patino-Lopez, Genaro, Nagashima, Kunio, Knepper, Mark A., Shen, Rong-Fong, Shaw, Stephen

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 8.10 MB

english, 2008

4

Decoy Methods for Assessing False Positives and False Discovery Rates in Shotgun Proteomics

Wang, Guanghui, Wu, Wells W., Zhang, Zheng, Masilamani, Shyama, Shen, Rong-Fong

Journal:

Analytical Chemistry

Year:

2009

Language:

english

File:

PDF, 2.59 MB

english, 2009

5

Rapid and enhanced proteolytic digestion using electric-field-oriented enzyme reactor

Yu Zhou, Tie Yi, Sung-Soo Park, Wayne Chadwick, Rong-Fong Shen, Wells W. Wu, Bronwen Martin, Stuart Maudsley

Journal:

Journal of Proteomics

Year:

2011

Language:

english

File:

PDF, 552 KB

english, 2011

6

In vacuo isotope coded alkylation technique (IVICAT); an N-terminal stable isotopic label for quantitative liquid chromatography/mass spectrometry proteomics

Brigitte L. Simons, Guanghui Wang, Rong-Fong Shen, Mark A. Knepper

Journal:

Rapid Communications in Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 492 KB

english, 2006

7

Using dissociation energies to predict observability of b- and y-peaks in mass spectra of short peptides

O. I. Obolensky, Wells W. Wu, Rong-Fong Shen, Yi-Kuo Yu

Journal:

Rapid Communications in Mass Spectrometry

Year:

2012

Language:

english

File:

PDF, 428 KB

english, 2012

8

Thromboxanes: Synthase and receptors

Rong-Fong Shen, Hsin-Hsiung Tai

Journal:

Journal of Biomedical Science

Year:

1998

Language:

english

File:

PDF, 2.59 MB

english, 1998

9

Identification of Proteins and Phosphoproteins Using Pulsed Q Collision Induced Dissociation (PQD)

Wells W. Wu, Guanghui Wang, Paul A. Insel, Cheng-Te Hsiao, Sige Zou, Stuart Maudsley, Bronwen Martin, Rong-Fong Shen

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2011

Language:

english

File:

PDF, 426 KB

english, 2011

10

Discovery of New Cargo Proteins that Enter Cells through Clathrin-Independent Endocytosis

Craig A. Eyster, Jason D. Higginson, Robert Huebner, Natalie Porat-Shliom, Roberto Weigert, Wells W. Wu, Rong-Fong Shen, Julie G. Donaldson

Journal:

Year:

2009

Language:

english

File:

PDF, 1.09 MB

english, 2009

11

Precursor ion exclusion for enhanced identification of plasma biomarkers

Wells W. Wu, Rong-Fong Shen, Sung-Soo Park, Bronwen Martin, Stuart Maudsley

Journal:

PROTEOMICS - Clinical Applications

Year:

2012

Language:

english

File:

PDF, 712 KB

english, 2012

12

Proteomic fingerprinting of HIV-1-infected human monocyte-derived macrophages: a preliminary report

Kimberly A. Carlson, Pawel Ciborowski, Courtney N. Schellpeper, Toni M. Biskup, Rong-Fong Shen, Xiaoguang Luo, Christopher J. Destache, Howard E. Gendelman

Journal:

Journal of Neuroimmunology

Year:

2004

Language:

english

File:

PDF, 479 KB

english, 2004

13

Discovery- and target-based protein quantification using iTRAQ and pulsed Q collision induced dissociation (PQD)

Wells W. Wu, Guanghui Wang, Paul A. Insel, Cheng-Te Hsiao, Sige Zou, Bronwen Martin, Stuart Maudsley, Rong-Fong Shen

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 575 KB

english, 2012

14

Genomic Organization, Chromosomal Localization, and Expression of the Murine Thromboxane Synthase Gene (Tbxas1)

Liqun Zhang, Hong Xiao, Roger A. Schultz, Rong-Fong Shen

Journal:

Year:

1997

Language:

english

File:

PDF, 909 KB

english, 1997

15

12-L-hydroxy-5,8,10-heptadecatrienoic acid (HHT) is an excellent substrate for NAD+-dependent 15-hydroxyprostaglandin dehydrogenase

Ying Liu, Kazuaki Yoden, Rong-Fong Shen, Hsin-Hsiung Tai

Journal:

Biochemical and Biophysical Research Communications

Year:

1985

Language:

english

File:

PDF, 427 KB

english, 1985

16

Genomic structure and polymorphism of the human thromboxane synthase-encoding gene

Seung Joon Baek, Kuan-Der Lee, Rong-Fong Shen

Journal:

Year:

1996

Language:

english

File:

PDF, 810 KB

english, 1996

17

A general approach for investigating enzymatic pathways and substrates for ubiquitin-like modifiers

Tianwei Li, Rasa Santockyte, Rong-Fong Shen, Ephrem Tekle, Guanghui Wang, David C.H. Yang, P. Boon Chock

Journal:

Archives of Biochemistry and Biophysics

Year:

2006

Language:

english

File:

PDF, 248 KB

english, 2006

18

FAT10 modifies p53 and upregulates its transcriptional activity

Tianwei Li, Rasa Santockyte, Shiqin Yu, Rong-Fong Shen, Ephrem Tekle, Caroline G.L. Lee, David C.H. Yang, P. Boon Chock

Journal:

Archives of Biochemistry and Biophysics

Year:

2011

Language:

english

File:

PDF, 731 KB

english, 2011

19

Diverse range of small peptides associated with high-density lipoprotein

Glen L. Hortin, Rong-Fong Shen, Brian M. Martin, Alan T. Remaley

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 144 KB

english, 2006

20

Covalent modification of stathmin by CCNU determined by FTMS analysis of modified proteins and tryptic peptides

Wells W. Wu, Guanghui Wang, Xing-Jie Liang, John K. Park, Rong-Fong Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2008

Language:

english

File:

PDF, 2.64 MB

english, 2008

21

Proteomic profiling of human plasma exosomes identifies PPARγ as an exosome-associated protein

Christopher Looze, David Yui, Lester Leung, Matthew Ingham, Maryann Kaler, Xianglan Yao, Wells W. Wu, Rong-Fong Shen, Mathew P. Daniels, Stewart J. Levine

Journal:

Biochemical and Biophysical Research Communications

Year:

2009

Language:

english

File:

PDF, 324 KB

english, 2009

22

A 4 bp deletion mutation in DLX3 enhances osteoblastic differentiation and bone formation in vitro

Sun Jin Choi, In Sun Song, Ok Hee Ryu, Sung Won Choi, P. Suzanne Hart, Wells W. Wu, Rong-Fong Shen, Thomas C. Hart

Journal:

Year:

2008

Language:

english

File:

PDF, 1.08 MB

english, 2008

23

Effective correction of experimental errors in quantitative proteomics using stable isotope labeling by amino acids in cell culture (SILAC)

Sung-Soo Park, Wells W. Wu, Yu Zhou, Rong-Fong Shen, Bronwen Martin, Stuart Maudsley

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 1.10 MB

english, 2012

24

Calibrating E-values for MS2database search methods

Gelio Alves, Aleksey Y Ogurtsov, Wells W Wu, Guanghui Wang, Rong-Fong Shen, Yi-Kuo Yu

Journal:

Year:

2007

Language:

english

File:

PDF, 893 KB

english, 2007

25

Detection of co-eluted peptides using database search methods

Gelio Alves, Aleksey Y Ogurtsov, Siwei Kwok, Wells W Wu, Guanghui Wang, Rong-Fong Shen, Yi-Kuo Yu

Journal:

Year:

2008

Language:

english

File:

PDF, 1.13 MB

english, 2008

26

Comparative Study of Three Proteomic Quantitative Methods, DIGE, cICAT, and iTRAQ, Using 2D Gel- or LC−MALDI TOF/TOF

Wu, Wells W., Wang, Guanghui, Baek, Seung Joon, Shen, Rong-Fong

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 216 KB

english, 2006

27

Proteomic Studies of PP2A-B56γ1 Phosphatase Complexes Reveal Phosphorylation-Regulated Partners in Cardiac Local Signaling

Zhou, Xing Wang, Mudannayake, Malkanthi, Green, Mariah, Gigena, Marisa S., Wang, Guanghui, Shen, Rong-Fong, Rogers, Terry B.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 376 KB

english, 2007

28

A botanical containing freeze dried açai pulp promotes healthy aging and reduces oxidative damage insod1knockdown flies

Mara Laslo, Xiaoping Sun, Cheng-Te Hsiao, Wells W. Wu, Rong-Fong Shen, Sige Zou

Journal:

Year:

2013

Language:

english

File:

PDF, 594 KB

english, 2013

29

The porcine thromboxane synthase-encoding cDNA: sequence, mRNA expression and enzyme production m Sf9 insect cells

Shen, Rong-Fong, Zhang, Liqun, Baek, Seung Joon, Tai, Hsin-Hsiung, Lee, Kuan-Der

Journal:

Year:

1994

Language:

english

File:

PDF, 767 KB

english, 1994

30

Using dissociation energies to predict observability of b- and y-peaks in mass spectra of short peptides. II. Results for hexapeptides with non-polar side chains

Obolensky, O. I., Wu, Wells W., Shen, Rong-Fong, Yu, Yi-Kuo

Journal:

Rapid Communications in Mass Spectrometry

Year:

2013

Language:

english

File:

PDF, 370 KB

english, 2013

31

Label-Free Protein Quantification Using LC-Coupled Ion Trap or FT Mass Spectrometry: Reproducibility, Linearity, and Application with Complex Proteomes

Wang, Guanghui, Wu, Wells W., Zeng, Weihua, Chou, Chung-Lin, Shen, Rong-Fong

Journal:

Journal of Proteome Research

Year:

2006

Language:

english

File:

PDF, 229 KB

english, 2006

32

Retroviral-Mediated Gene Transfer and Expression of Human Phenylalanine Hydroxylase in Primary Mouse Hepatocytes

Hong Peng, Donna Armentano, Leslie MacKenzie-Graham, Rong-Fong Shen, Gretchen Darlington, Fred D. Ledley and Savio L. C. Woo

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 1.24 MB

english, 1988

33

Sensitive Carbohydrate Detection Using Surface Enhanced Raman Tagging

Vangala, Karthikeshwar, Yanney, Michael, Hsiao, Cheng-Te, Wu, Wells W., Shen, Rong-Fong, Zou, Sige, Sygula, Andrzej, Zhang, Dongmao

Journal:

Analytical Chemistry

Year:

2010

Language:

english

File:

PDF, 281 KB

english, 2010

34

An Automated Platform for Analysis of Phosphoproteomic Datasets: Application to Kidney Collecting Duct Phosphoproteins

Hoffert, Jason D., Wang, Guanghui, Pisitkun, Trairak, Shen, Rong-Fong, Knepper, Mark A.

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 451 KB

english, 2007

35

Proteomic Sequencing and Identification Using Tandam Mass Spectrometry

Shen, Rong-Fong

Journal:

Journal of Proteome Research

Year:

2002

Language:

english

File:

PDF, 1.76 MB

english, 2002

36

Identification and Quantification of Basic and Acidic Proteins Using Solution-Based Two-Dimensional Protein Fractionation and Label-Free or 18 O-Labeling Mass Spectrometry

Wu, Wells W., Wang, Guanghui, Yu, Ming-Jiun, Knepper, Mark A., Shen, Rong-Fong

Journal:

Journal of Proteome Research

Year:

2007

Language:

english

File:

PDF, 546 KB

english, 2007

37

Automated Quantification Tool for High-Throughput Proteomics Using Stable Isotope Labeling and LC−MS n

Wang, Guanghui, Wu, Wells W., Pisitkun, Trairak, Hoffert, Jason D., Knepper, Mark A., Shen, Rong-Fong

Journal:

Analytical Chemistry

Year:

2006

Language:

english

File:

PDF, 739 KB

english, 2006

38

Enhancing Peptide Identification Confidence by Combining Search Methods

Alves, Gelio, Wu, Wells W., Wang, Guanghui, Shen, Rong-Fong, Yu, Yi-Kuo

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 2.96 MB

english, 2008

39

Global Protein Identification and Quantification Technology Using Two-Dimensional Liquid Chromatography Nanospray Mass Spectrometry

Chelius, Dirk, Zhang, Terry, Wang, Guanghui, Shen, Rong-Fong

Journal:

Analytical Chemistry

Year:

2003

Language:

english

File:

PDF, 176 KB

english, 2003

40

Mitochondrial Matrix Phosphoproteome: Effect of Extra Mitochondrial Calcium †

Hopper, Rachel K., Carroll, Stefanie, Aponte, Angel M., Johnson, D. Thor, French, Stephanie, Shen, Rong-Fong, Witzmann, Frank A., Harris, Robert A., Balaban, Robert S.

Journal:

Year:

2006

Language:

english

File:

PDF, 618 KB

english, 2006

41

Tissue-Specific Regulation of Human α 1 -Antitrypsin Gene Expression in Transgenic Mice

SHEN, RONG-FONG, CLIFT, SHIRLEY M., DeMAYO, JANET L., SIFERS, RICHARD N., FINEGOLD, MILTON J., WOO, SAVIO L.C.

Journal:

Year:

1989

Language:

english

File:

PDF, 5.04 MB

english, 1989

42

Thromboxanes: Synthase and Receptors

Shen, Rong-Fong, Tai, Hsin-Hsiung

Journal:

Journal of Biomedical Science

Year:

1998

Language:

english

File:

PDF, 462 KB

english, 1998

43

Multiple factors regulating the expression of human thromboxane synthase gene

LEE, Kuan-Der, BAEK, Seung Joon, SHEN, Rong-Fong

Journal:

Biochemical Journal

Year:

1996

Language:

english

File:

PDF, 469 KB

english, 1996

44

Complex Nature of Protein Carbonylation Specificity After Metal-Catalyzed Oxidation

Kryndushkin, Dmitry, Wu, Wells W., Venna, Ramesh, Norcross, Michael A., Shen, Rong-Fong, Rao, V. Ashutosh

Journal:

Pharmaceutical Research

Year:

2017

Language:

english

File:

PDF, 1.13 MB

english, 2017

45

High-throughput identification of IMCD proteins using LC-MS/MS

Pisitkun, Trairak, Bieniek, Jared, Tchapyjnikov, Dmitry, Wang, Guanghui, Wu, Wells W., Shen, Rong-Fong, Knepper, Mark A.

Journal:

Physiological Genomics

Year:

2006

Language:

english

File:

PDF, 791 KB

english, 2006

46

Identification of Sialic Acid Linkages on Intact Glycopeptides via Differential Chemical Modification Using IntactGIG-HILIC

Yang, Shuang, Wu, Wells W., Shen, Rong-Fong, Bern, Marshall, Cipollo, John

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2018

Language:

english

File:

PDF, 2.21 MB

english, 2018

47

Robust Sub-nanomolar Library Preparation for High Throughput Next Generation Sequencing

Wu, Wells W., Phue, Je-Nie, Lee, Chun-Ting, Lin, Changyi, Xu, Lai, Wang, Rong, Zhang, Yaqin, Shen, Rong-Fong

Journal:

Year:

2018

Language:

english

File:

PDF, 3.23 MB

english, 2018

48

3D brain Organoids derived from pluripotent stem cells: promising experimental models for brain development and neurodegenerative disorders

Lee, Chun-Ting, Bendriem, Raphael M., Wu, Wells W., Shen, Rong-Fong

Journal:

Journal of Biomedical Science

Year:

2017

Language:

english

File:

PDF, 1.13 MB

english, 2017

49

Mediator of DNA Damage Checkpoint 1 (MDC1) Contributes to High NaCl-Induced Activation of the Osmoprotective Transcription Factor TonEBP/OREBP

Kunin, Margarita, Dmitrieva, Natalia I., Gallazzini, Morgan, Shen, Rong-Fong, Wang, Guanghui, Burg, Maurice B., Ferraris, Joan D., Deb, Sumitra

Journal:

Year:

2010

Language:

english

File:

PDF, 826 KB

english, 2010

50

The Protein Network Surrounding the Human Telomere Repeat Binding Factors TRF1, TRF2, and POT1

Giannone, Richard J., McDonald, Hayes W., Hurst, Gregory B., Shen, Rong-Fong, Wang, Yisong, Liu, Yie, Sullivan, Beth A.

Journal:

Year:

2010

Language:

english

File:

PDF, 1.33 MB

english, 2010

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